multi_dendrix.A

multi_dendrix.A(patient2mutations, gene, patient)

Mutation matrix accessor function (see ILP()).

Parameters:

• patient2mutations (dictionary) – mapping of patients to the genes in which they have mutations.
• gene (string) – gene name.
• patient (string) – patient name.

Returns:

1 if gene g is mutated in the given patient, 0 otherwise.

Examples:

>>> A({"TCGA-01" : ["G2", "G3"], "G2", "TCGA-01"})
1
>>> A({"TCGA-01" : ["G2", "G3"], "G1", "TCGA-01"})
0