paste3.visualization.plot_slice

paste3.visualization.plot_slice(slice, color, ax=None, s=100)[source]

Plots slice spatial coordinates.

Parameters:
  • slice (AnnData) -- Slice to be plotted.

  • color -- Scatterplot color, any format accepted by matplotlib.

  • ax (Optional[Axes]) -- Pre-existing axes for the plot. Otherwise, call matplotlib.pyplot.gca() internally.

  • s (float) -- Size of spots.

Return type:

None