Installation instructions for Multi-Dendrix

Downloading and installing

To download the latest version of Multi-Dendrix, you can clone from GitHub:

git clone https://github.com/mdml/multi-dendrix.git

or by visiting https://github.com/mdml/multi-dendrix where you can download a zipped-version of the files.

After pulling from Github, simply run:

python setup.py install

After that, please visit Getting started or just try running some of the scripts.

System requirements

Multi-Dendrix was developed on 64-bit Debian Linux. It has not been tested on other systems.

The Multi-Dendrix package requires the following Python modules:

• IBM’s CPLEX.
• NetworkX.
• Either SciPy >= version 0.11 or fisher0.1.4.

In addition, for web output with network figures, Multi-Dendrix requires the installation of GraphViz.